IMPPAT Phytochemical information: 
Hinokinin

Hinokinin
Summary

SMILES: O=C1OC[C@@H]([C@H]1Cc1ccc2c(c1)OCO2)Cc1ccc2c(c1)OCO2
InChI: InChI=1S/C20H18O6/c21-20-15(6-13-2-4-17-19(8-13)26-11-24-17)14(9-22-20)5-12-1-3-16-18(7-12)25-10-23-16/h1-4,7-8,14-15H,5-6,9-11H2/t14-,15+/m0/s1
InChIKey: DDWGQGZPYDSYEL-LSDHHAIUSA-N
DeepSMILES: O=COC[C@@H][C@H]5Ccccccc6)OCO5))))))))))Ccccccc6)OCO5
Scaffold Graph/Node/Bond level: O=C1OCC(Cc2ccc3c(c2)OCO3)C1Cc1ccc2c(c1)OCO2
Scaffold Graph/Node level: OC1OCC(CC2CCC3OCOC3C2)C1CC1CCC2OCOC2C1
Scaffold Graph level: CC1CCC(CC2CCC3CCCC3C2)C1CC1CCC2CCCC2C1
Functional groups: COC(=O)C; c1cOCO1
Chemical classification
ClassyFire Kingdom: Organic compounds
ClassyFire Superclass: Lignans, neolignans and related compounds
ClassyFire Class: Furanoid lignans
ClassyFire Subclass: Tetrahydrofuran lignans
NP Classifier Biosynthetic pathway: Shikimates and Phenylpropanoids
NP Classifier Superclass: Lignans
NP Classifier Class: Dibenzylbutyrolactone lignans
Synonymous chemical names:
hinkokinin, (+-)-hinokinin, hinokinin, (-)-hinokinin, (-) hinokinin, (-)hinokinin
External chemical identifiers:
CID:CID_442879; ChEMBL:CHEMBL242011; ChEBI:CHEBI:5722; ZINC:ZINC000001872258; SureChEMBL:SCHEMBL1121862; MolPort-039-338-821
Chemical structure download


Hinokinin
Physicochemical properties
Property name Tool Property value
Molecular weight (g/mol) RDKit 354.36
Log P RDKit 2.72
Topological polar surface area (Å2) RDKit 63.22
Number of hydrogen bond acceptors RDKit 6
Number of hydrogen bond donors RDKit 0
Number of carbon atoms RDKit 20
Number of heavy atoms RDKit 26
Number of heteroatoms RDKit 6
Number of nitrogen atoms RDKit 0
Number of sulfur atoms RDKit 0
Number of chiral carbon atoms RDKit 2
Stereochemical complexity RDKit 0.1
Number of sp hybridized carbon atoms RDKit 0
Number of sp2 hybridized carbon atoms RDKit 13
Number of sp3 hybridized carbon atoms RDKit 7
Shape complexity RDKit 0.35
Number of rotatable bonds RDKit 4
Number of aliphatic carbocycles RDKit 0
Number of aliphatic heterocycles RDKit 3
Number of aliphatic rings RDKit 3
Number of aromatic carbocycles RDKit 2
Number of aromatic heterocycles RDKit 0
Number of aromatic rings RDKit 2
Total number of rings RDKit 5
Number of saturated carbocycles RDKit 0
Number of saturated heterocycles RDKit 1
Number of saturated rings RDKit 1
Number of Smallest Set of Smallest Rings (SSSR) RDKit 5


Hinokinin
Drug-likeness
Property nameToolProperty value
Number of Lipinski’s rule of 5 violations RDKit 0
Lipinski’s rule of 5 filter RDKit Passed
Number of Ghose filter violations RDKit 0
Ghose filter RDKit Passed
Veber filter RDKit Good
Pfizer 3/75 filter RDKit Bad
GSK 4/400 filter RDKit Good
Weighted quantitative estimate of drug-likeness (QEDw) score RDKit 0.786984


Hinokinin
ADME properties
Property nameToolProperty value
Bioavailability score SwissADME 0.55
Solubility class [ESOL] SwissADME Moderately soluble
Solubility class [Silicos-IT] SwissADME Moderately soluble
Blood Brain Barrier permeation SwissADME Yes
Gastrointestinal absorption SwissADME High
Log Kp (Skin permeation, cm/s) SwissADME -5.87
Number of PAINS structural alerts SwissADME 0
Number of Brenk structural alerts SwissADME 0
CYP1A2 inhibitor SwissADME Yes
CYP2C19 inhibitor SwissADME Yes
CYP2C9 inhibitor SwissADME Yes
CYP2D6 inhibitor SwissADME Yes
CYP3A4 inhibitor SwissADME Yes
P-glycoprotein substrate SwissADME No


Hinokinin
Phytochemical - Human target proteins supported by experimental evidence associations
Human target proteins supported by experimental evidence
IMPPAT target identifierGene identifierHGNC symbolEntrez Gene identifierSource
TAR_EXP_001525ENSG00000132164SLC6A116538BindingDB, NPASS
TAR_EXP_001506ENSG00000079215SLC1A36507BindingDB, NPASS
TAR_EXP_001505ENSG00000110436SLC1A26506ChEMBL, NPASS
TAR_EXP_001504ENSG00000106688SLC1A16505BindingDB, NPASS
TAR_EXP_000280ENSG00000160868CYP3A41576BindingDB, ChEMBL, NPASS
TAR_EXP_000276ENSG00000272532CYP2D61565ChEMBL, NPASS
TAR_EXP_001524ENSG00000196517SLC6A96536NPASS
TAR_EXP_001517ENSG00000157103SLC6A16529BindingDB, ChEMBL, NPASS
TAR_EXP_001520ENSG00000108576SLC6A46532NPASS
TAR_EXP_001518ENSG00000103546SLC6A26530ChEMBL, NPASS
TAR_EXP_001519ENSG00000142319SLC6A36531ChEMBL, NPASS