IMPPAT Phytochemical information: 
1,4-Diaminobutane

1,4-Diaminobutane
Summary

SMILES: NCCCCN
InChI: InChI=1S/C4H12N2/c5-3-1-2-4-6/h1-6H2
InChIKey: KIDHWZJUCRJVML-UHFFFAOYSA-N
DeepSMILES: NCCCCN
Functional groups: CN
Chemical classification
ClassyFire Kingdom: Organic compounds
ClassyFire Superclass: Organic nitrogen compounds
ClassyFire Class: Organonitrogen compounds
ClassyFire Subclass: Amines
NP Classifier Biosynthetic pathway: Alkaloids
NP Classifier Superclass: Pseudoalkaloids|Ornithine alkaloids
NP Classifier Class: Acetate-derived alkaloids|Polyamines
Synonymous chemical names:
putrescine, 1,4-butanediamine
External chemical identifiers:
CID:CID_1045; ChEMBL:CHEMBL46257; ChEBI:CHEBI:17148; ZINC:ZINC000005828633; FDASRS:V10TVZ52E4; SureChEMBL:SCHEMBL21642; MolPort-001-781-809
Chemical structure download


1,4-Diaminobutane
Physicochemical properties
Property name Tool Property value
Molecular weight (g/mol) RDKit 88.15
Log P RDKit -0.32
Topological polar surface area (Å2) RDKit 52.04
Number of hydrogen bond acceptors RDKit 2
Number of hydrogen bond donors RDKit 2
Number of carbon atoms RDKit 4
Number of heavy atoms RDKit 6
Number of heteroatoms RDKit 2
Number of nitrogen atoms RDKit 2
Number of sulfur atoms RDKit 0
Number of chiral carbon atoms RDKit 0
Stereochemical complexity RDKit 0
Number of sp hybridized carbon atoms RDKit 0
Number of sp2 hybridized carbon atoms RDKit 0
Number of sp3 hybridized carbon atoms RDKit 4
Shape complexity RDKit 1
Number of rotatable bonds RDKit 3
Number of aliphatic carbocycles RDKit 0
Number of aliphatic heterocycles RDKit 0
Number of aliphatic rings RDKit 0
Number of aromatic carbocycles RDKit 0
Number of aromatic heterocycles RDKit 0
Number of aromatic rings RDKit 0
Total number of rings RDKit 0
Number of saturated carbocycles RDKit 0
Number of saturated heterocycles RDKit 0
Number of saturated rings RDKit 0
Number of Smallest Set of Smallest Rings (SSSR) RDKit 0


1,4-Diaminobutane
Drug-likeness
Property nameToolProperty value
Number of Lipinski’s rule of 5 violations RDKit 0
Lipinski’s rule of 5 filter RDKit Passed
Number of Ghose filter violations RDKit 3
Ghose filter RDKit Failed
Veber filter RDKit Good
Pfizer 3/75 filter RDKit Bad
GSK 4/400 filter RDKit Good
Weighted quantitative estimate of drug-likeness (QEDw) score RDKit 0.464599


1,4-Diaminobutane
ADME properties
Property nameToolProperty value
Bioavailability score SwissADME 0.55
Solubility class [ESOL] SwissADME Highly soluble
Solubility class [Silicos-IT] SwissADME Soluble
Blood Brain Barrier permeation SwissADME No
Gastrointestinal absorption SwissADME High
Log Kp (Skin permeation, cm/s) SwissADME -7.33
Number of PAINS structural alerts SwissADME 0
Number of Brenk structural alerts SwissADME 0
CYP1A2 inhibitor SwissADME No
CYP2C19 inhibitor SwissADME No
CYP2C9 inhibitor SwissADME No
CYP2D6 inhibitor SwissADME No
CYP3A4 inhibitor SwissADME No
P-glycoprotein substrate SwissADME No


1,4-Diaminobutane
Phytochemical - Human target proteins supported by experimental evidence associations
Human target proteins supported by experimental evidence
IMPPAT target identifierGene identifierHGNC symbolEntrez Gene identifierSource
TAR_EXP_001541ENSG00000197208SLC22A46583ChEMBL
TAR_EXP_001366ENSG00000117152RGS45999NPASS
TAR_EXP_000565ENSG00000123505AMD1262ChEMBL, NPASS
TAR_EXP_000004ENSG00000094631HDAC610013ChEMBL
TAR_EXP_000968ENSG00000109320NFKB14790NPASS