IMPPAT Phytochemical information: 
Pentagalloylglucose

Pentagalloylglucose
Summary

SMILES: O=C(c1cc(O)c(c(c1)O)O)O[C@@H]1O[C@H](COC(=O)c2cc(O)c(c(c2)O)O)[C@H]([C@@H]([C@H]1OC(=O)c1cc(O)c(c(c1)O)O)OC(=O)c1cc(O)c(c(c1)O)O)OC(=O)c1cc(O)c(c(c1)O)O
InChI: InChI=1S/C41H32O26/c42-17-1-12(2-18(43)28(17)52)36(57)62-11-27-33(64-37(58)13-3-19(44)29(53)20(45)4-13)34(65-38(59)14-5-21(46)30(54)22(47)6-14)35(66-39(60)15-7-23(48)31(55)24(49)8-15)41(63-27)67-40(61)16-9-25(50)32(56)26(51)10-16/h1-10,27,33-35,41-56H,11H2/t27-,33-,34+,35-,41+/m1/s1
InChIKey: QJYNZEYHSMRWBK-NIKIMHBISA-N
DeepSMILES: O=CcccO)ccc6)O))O)))))O[C@@H]O[C@H]COC=O)cccO)ccc6)O))O))))))))[C@H][C@@H][C@H]6OC=O)cccO)ccc6)O))O))))))))OC=O)cccO)ccc6)O))O))))))))OC=O)cccO)ccc6)O))O
Scaffold Graph/Node/Bond level: O=C(OCC1OC(OC(=O)c2ccccc2)C(OC(=O)c2ccccc2)C(OC(=O)c2ccccc2)C1OC(=O)c1ccccc1)c1ccccc1
Scaffold Graph/Node level: OC(OCC1OC(OC(O)C2CCCCC2)C(OC(O)C2CCCCC2)C(OC(O)C2CCCCC2)C1OC(O)C1CCCCC1)C1CCCCC1
Scaffold Graph level: CC(CCC1CC(CC(C)C2CCCCC2)C(CC(C)C2CCCCC2)C(CC(C)C2CCCCC2)C1CC(C)C1CCCCC1)C1CCCCC1
Functional groups: cC(=O)O[C@@H](C)OC; cO; cC(=O)OC
Chemical classification
ClassyFire Kingdom: Organic compounds
ClassyFire Superclass: Phenylpropanoids and polyketides
ClassyFire Class: Tannins
NP Classifier Biosynthetic pathway: Shikimates and Phenylpropanoids
NP Classifier Superclass: Phenolic acids (C6-C1)
NP Classifier Class: Gallotannins
Synonymous chemical names:
beta-penta-o-galloyl-d-glucose, pentagalloyl glucose, 1,2,3,4,6-penta-o-galloyl-beta-d-glucose, 1,2,3,4,6-penta-o-galloyl-β-d-glucose, Glucose, 1,2,3,4,6-penta-O-galloyl, 1,2,3,4,6-pentagalloylglucose
External chemical identifiers:
CID:CID_65238; ChEMBL:CHEMBL382408; ChEBI:CHEBI:18082; ZINC:ZINC000169292785; FDASRS:3UI3K8W93I; SureChEMBL:SCHEMBL640108; MolPort-001-741-210
Chemical structure download


Pentagalloylglucose
Physicochemical properties
Property name Tool Property value
Molecular weight (g/mol) RDKit 940.68
Log P RDKit 1.69
Topological polar surface area (Å2) RDKit 444.18
Number of hydrogen bond acceptors RDKit 26
Number of hydrogen bond donors RDKit 15
Number of carbon atoms RDKit 41
Number of heavy atoms RDKit 67
Number of heteroatoms RDKit 26
Number of nitrogen atoms RDKit 0
Number of sulfur atoms RDKit 0
Number of chiral carbon atoms RDKit 5
Stereochemical complexity RDKit 0.12
Number of sp hybridized carbon atoms RDKit 0
Number of sp2 hybridized carbon atoms RDKit 35
Number of sp3 hybridized carbon atoms RDKit 6
Shape complexity RDKit 0.15
Number of rotatable bonds RDKit 16
Number of aliphatic carbocycles RDKit 0
Number of aliphatic heterocycles RDKit 1
Number of aliphatic rings RDKit 1
Number of aromatic carbocycles RDKit 5
Number of aromatic heterocycles RDKit 0
Number of aromatic rings RDKit 5
Total number of rings RDKit 6
Number of saturated carbocycles RDKit 0
Number of saturated heterocycles RDKit 1
Number of saturated rings RDKit 1
Number of Smallest Set of Smallest Rings (SSSR) RDKit 6


Pentagalloylglucose
Drug-likeness
Property nameToolProperty value
Number of Lipinski’s rule of 5 violations RDKit 3
Lipinski’s rule of 5 filter RDKit Failed
Number of Ghose filter violations RDKit 3
Ghose filter RDKit Failed
Veber filter RDKit Bad
Pfizer 3/75 filter RDKit Good
GSK 4/400 filter RDKit Bad
Weighted quantitative estimate of drug-likeness (QEDw) score RDKit 0.0508644


Pentagalloylglucose
ADME properties
Property nameToolProperty value
Bioavailability score SwissADME 0.17
Solubility class [ESOL] SwissADME Poorly soluble
Solubility class [Silicos-IT] SwissADME Soluble
Blood Brain Barrier permeation SwissADME No
Gastrointestinal absorption SwissADME Low
Log Kp (Skin permeation, cm/s) SwissADME -9.49
Number of PAINS structural alerts SwissADME 1
Number of Brenk structural alerts SwissADME 2
CYP1A2 inhibitor SwissADME No
CYP2C19 inhibitor SwissADME No
CYP2C9 inhibitor SwissADME No
CYP2D6 inhibitor SwissADME No
CYP3A4 inhibitor SwissADME No
P-glycoprotein substrate SwissADME Yes


Pentagalloylglucose
Phytochemical - Human target proteins supported by experimental evidence associations
Human target proteins supported by experimental evidence
IMPPAT target identifierGene identifierHGNC symbolEntrez Gene identifierSource
TAR_EXP_000991ENSG00000135318NT5E4907ChEMBL, NPASS
TAR_EXP_001207ENSG00000154229PRKCA5578BindingDB, ChEMBL
TAR_EXP_001223ENSG00000184304PRKD15587ChEMBL
TAR_EXP_001306ENSG00000196396PTPN15770BindingDB
TAR_EXP_000166ENSG00000163297ANTXR2118429ChEMBL, NPASS
TAR_EXP_000611ENSG00000174876AMY1B277BindingDB
TAR_EXP_000609ENSG00000237763AMY1A276ChEMBL
TAR_EXP_000496ENSG00000115825PRKD323683ChEMBL
TAR_EXP_000491ENSG00000186318BACE123621BindingDB, ChEMBL, NPASS
TAR_EXP_001227ENSG00000067606PRKCZ5590ChEMBL
TAR_EXP_001226ENSG00000065675PRKCQ5588ChEMBL, NPASS
TAR_EXP_001308ENSG00000175354PTPN25771BindingDB
TAR_EXP_000410ENSG00000126218F102159BindingDB, ChEMBL, NPASS
TAR_EXP_001215ENSG00000027075PRKCH5583ChEMBL
TAR_EXP_001214ENSG00000126583PRKCG5582ChEMBL
TAR_EXP_001213ENSG00000171132PRKCE5581ChEMBL
TAR_EXP_001212ENSG00000163932PRKCD5580ChEMBL
TAR_EXP_001216ENSG00000163558PRKCI5584ChEMBL
TAR_EXP_001209ENSG00000166501PRKCB5579ChEMBL