IMPPAT Phytochemical information: 
Pentolinium tartrate

Pentolinium tartrate
Summary

SMILES: C[N+]1(CCCCC[N+]2(C)CCCC2)CCCC1.[O-]C(=O)[C@@H]([C@H](C(=O)O)O)O.[O-]C(=O)[C@@H]([C@H](C(=O)O)O)O
InChI: InChI=1S/C15H32N2.2C4H6O6/c1-16(12-6-7-13-16)10-4-3-5-11-17(2)14-8-9-15-17;2*5-1(3(7)8)2(6)4(9)10/h3-15H2,1-2H3;2*1-2,5-6H,(H,7,8)(H,9,10)/q+2;;/p-2/t;2*1-,2-/m.11/s1
InChIKey: HSMKTIKKPMTUQH-WBPXWQEISA-L
DeepSMILES: C[N+]CCCCC[N+]C)CCCC5))))))))))CCCC5.[O-]C=O)[C@@H][C@H]C=O)O))O))O.[O-]C=O)[C@@H][C@H]C=O)O))O))O
Scaffold Graph/Node/Bond level: C(CC[NH+]1CCCC1)CC[NH+]1CCCC1
Scaffold Graph/Node level: C(CCN1CCCC1)CCN1CCCC1
Scaffold Graph level: C(CCC1CCCC1)CCC1CCCC1
Functional groups: CC(=O)O; C[N+](C)(C)C; CO; CC(=O)[O-]
Chemical classification
ClassyFire Kingdom: Organic compounds
ClassyFire Superclass: Organic oxygen compounds
ClassyFire Class: Organooxygen compounds
ClassyFire Subclass: Carbohydrates and carbohydrate conjugates
Synonymous chemical names:
pendine
External chemical identifiers:
CID:CID_5849; ChEMBL:CHEMBL1318287; ChEBI:CHEBI:55326; FDASRS:953357GACY; SureChEMBL:SCHEMBL309647
Chemical structure download


Pentolinium tartrate
Physicochemical properties
Property name Tool Property value
Molecular weight (g/mol) RDKit 538.59
Log P RDKit -4.28
Topological polar surface area (Å2) RDKit 235.78
Number of hydrogen bond acceptors RDKit 10
Number of hydrogen bond donors RDKit 6
Number of carbon atoms RDKit 23
Number of heavy atoms RDKit 37
Number of heteroatoms RDKit 14
Number of nitrogen atoms RDKit 2
Number of sulfur atoms RDKit 0
Number of chiral carbon atoms RDKit 4
Stereochemical complexity RDKit 0.17
Number of sp hybridized carbon atoms RDKit 0
Number of sp2 hybridized carbon atoms RDKit 4
Number of sp3 hybridized carbon atoms RDKit 19
Shape complexity RDKit 0.83
Number of rotatable bonds RDKit 12
Number of aliphatic carbocycles RDKit 0
Number of aliphatic heterocycles RDKit 2
Number of aliphatic rings RDKit 2
Number of aromatic carbocycles RDKit 0
Number of aromatic heterocycles RDKit 0
Number of aromatic rings RDKit 0
Total number of rings RDKit 2
Number of saturated carbocycles RDKit 0
Number of saturated heterocycles RDKit 2
Number of saturated rings RDKit 2
Number of Smallest Set of Smallest Rings (SSSR) RDKit 2


Pentolinium tartrate
Drug-likeness
Property nameToolProperty value
Number of Lipinski’s rule of 5 violations RDKit 2
Lipinski’s rule of 5 filter RDKit Failed
Number of Ghose filter violations RDKit 3
Ghose filter RDKit Failed
Veber filter RDKit Bad
Pfizer 3/75 filter RDKit Good
GSK 4/400 filter RDKit Bad
Weighted quantitative estimate of drug-likeness (QEDw) score RDKit 0.102271


Pentolinium tartrate
ADME properties
Property nameToolProperty value
Bioavailability score SwissADME 0.11
Solubility class [ESOL] SwissADME Very soluble
Solubility class [Silicos-IT] SwissADME Moderately soluble
Blood Brain Barrier permeation SwissADME No
Gastrointestinal absorption SwissADME Low
Log Kp (Skin permeation, cm/s) SwissADME -10.57
Number of PAINS structural alerts SwissADME 0
Number of Brenk structural alerts SwissADME 1
CYP1A2 inhibitor SwissADME No
CYP2C19 inhibitor SwissADME No
CYP2C9 inhibitor SwissADME No
CYP2D6 inhibitor SwissADME No
CYP3A4 inhibitor SwissADME No
P-glycoprotein substrate SwissADME Yes


Pentolinium tartrate
Phytochemical - Human target proteins supported by experimental evidence associations
Human target proteins supported by experimental evidence
IMPPAT target identifierGene identifierHGNC symbolEntrez Gene identifierSource
TAR_EXP_000616ENSG00000111700SLCO1B328234ChEMBL
TAR_EXP_000061ENSG00000134538SLCO1B110599ChEMBL