IMPPAT Phytochemical information: 
2-Undecenoic acid

2-Undecenoic acid
Summary

SMILES: CCCCCCCC/C=C/C(=O)O
InChI: InChI=1S/C11H20O2/c1-2-3-4-5-6-7-8-9-10-11(12)13/h9-10H,2-8H2,1H3,(H,12,13)/b10-9+
InChIKey: IGBBVTAVILYDIO-MDZDMXLPSA-N
DeepSMILES: CCCCCCCC/C=C/C=O)O
Functional groups: C/C=C/C(=O)O
Chemical classification
ClassyFire Kingdom: Organic compounds
ClassyFire Superclass: Lipids and lipid-like molecules
ClassyFire Class: Fatty Acyls
ClassyFire Subclass: Fatty acids and conjugates
NP Classifier Biosynthetic pathway: Fatty acids
NP Classifier Superclass: Fatty Acids and Conjugates
NP Classifier Class: Unsaturated fatty acids
Synonymous chemical names:
2-undecenoic acid, trans-2-undecenoic acid
External chemical identifiers:
CID:CID_5282728; ChEMBL:CHEMBL3307202; ChEBI:CHEBI:39450; ZINC:ZINC000002390028; SureChEMBL:SCHEMBL17828; MolPort-023-221-985
Chemical structure download


2-Undecenoic acid
Physicochemical properties
Property name Tool Property value
Molecular weight (g/mol) RDKit 184.28
Log P RDKit 3.38
Topological polar surface area (Å2) RDKit 37.3
Number of hydrogen bond acceptors RDKit 1
Number of hydrogen bond donors RDKit 1
Number of carbon atoms RDKit 11
Number of heavy atoms RDKit 13
Number of heteroatoms RDKit 2
Number of nitrogen atoms RDKit 0
Number of sulfur atoms RDKit 0
Number of chiral carbon atoms RDKit 0
Stereochemical complexity RDKit 0
Number of sp hybridized carbon atoms RDKit 0
Number of sp2 hybridized carbon atoms RDKit 3
Number of sp3 hybridized carbon atoms RDKit 8
Shape complexity RDKit 0.73
Number of rotatable bonds RDKit 8
Number of aliphatic carbocycles RDKit 0
Number of aliphatic heterocycles RDKit 0
Number of aliphatic rings RDKit 0
Number of aromatic carbocycles RDKit 0
Number of aromatic heterocycles RDKit 0
Number of aromatic rings RDKit 0
Total number of rings RDKit 0
Number of saturated carbocycles RDKit 0
Number of saturated heterocycles RDKit 0
Number of saturated rings RDKit 0
Number of Smallest Set of Smallest Rings (SSSR) RDKit 0


2-Undecenoic acid
Drug-likeness
Property nameToolProperty value
Number of Lipinski’s rule of 5 violations RDKit 0
Lipinski’s rule of 5 filter RDKit Passed
Number of Ghose filter violations RDKit 0
Ghose filter RDKit Passed
Veber filter RDKit Good
Pfizer 3/75 filter RDKit Bad
GSK 4/400 filter RDKit Good
Weighted quantitative estimate of drug-likeness (QEDw) score RDKit 0.463551


2-Undecenoic acid
ADME properties
Property nameToolProperty value
Bioavailability score SwissADME 0.85
Solubility class [ESOL] SwissADME Soluble
Solubility class [Silicos-IT] SwissADME Soluble
Blood Brain Barrier permeation SwissADME Yes
Gastrointestinal absorption SwissADME High
Log Kp (Skin permeation, cm/s) SwissADME -4.38
Number of PAINS structural alerts SwissADME 0
Number of Brenk structural alerts SwissADME 1
CYP1A2 inhibitor SwissADME No
CYP2C19 inhibitor SwissADME No
CYP2C9 inhibitor SwissADME No
CYP2D6 inhibitor SwissADME No
CYP3A4 inhibitor SwissADME No
P-glycoprotein substrate SwissADME No


2-Undecenoic acid
Phytochemical - Human target proteins supported by experimental evidence associations
Human target proteins supported by experimental evidence
IMPPAT target identifierGene identifierHGNC symbolEntrez Gene identifierSource
TAR_EXP_001277ENSG00000239836PSMB95698ChEMBL, NPASS
TAR_EXP_001276ENSG00000235715PSMB85696ChEMBL, NPASS
TAR_EXP_001274ENSG00000142507PSMB65694ChEMBL, NPASS
TAR_EXP_001267ENSG00000126067PSMB25690ChEMBL, NPASS
TAR_EXP_001269ENSG00000277791PSMB35691ChEMBL, NPASS
TAR_EXP_000004ENSG00000094631HDAC610013ChEMBL
TAR_EXP_001270ENSG00000159377PSMB45692ChEMBL, NPASS
TAR_EXP_001264ENSG00000100902PSMA65687ChEMBL, NPASS
TAR_EXP_001278ENSG00000205220PSMB105699ChEMBL, NPASS
TAR_EXP_001273ENSG00000100804PSMB55693ChEMBL, NPASS
TAR_EXP_001265ENSG00000101182PSMA75688ChEMBL, NPASS
TAR_EXP_001263ENSG00000143106PSMA55686ChEMBL, NPASS
TAR_EXP_001262ENSG00000041357PSMA45685ChEMBL, NPASS
TAR_EXP_001266ENSG00000008018PSMB15689ChEMBL, NPASS
TAR_EXP_001260ENSG00000106588PSMA25683ChEMBL, NPASS
TAR_EXP_001259ENSG00000129084PSMA15682ChEMBL, NPASS
TAR_EXP_000223ENSG00000154611PSMA8143471ChEMBL, NPASS
TAR_EXP_001275ENSG00000136930PSMB75695ChEMBL, NPASS
TAR_EXP_000174ENSG00000222028PSMB11122706ChEMBL, NPASS
TAR_EXP_001261ENSG00000100567PSMA35684ChEMBL, NPASS