IMPPAT Phytochemical information: 
Papaveraldine

Papaveraldine
Summary

SMILES: COc1ccc(cc1OC)C(=O)c1nccc2c1cc(OC)c(c2)OC
InChI: InChI=1S/C20H19NO5/c1-23-15-6-5-13(10-16(15)24-2)20(22)19-14-11-18(26-4)17(25-3)9-12(14)7-8-21-19/h5-11H,1-4H3
InChIKey: QJTBIAMBPGGIGI-UHFFFAOYSA-N
DeepSMILES: COcccccc6OC))))C=O)cncccc6ccOC))cc6)OC
Scaffold Graph/Node/Bond level: O=C(c1ccccc1)c1nccc2ccccc12
Scaffold Graph/Node level: OC(C1CCCCC1)C1NCCC2CCCCC21
Scaffold Graph level: CC(C1CCCCC1)C1CCCC2CCCCC21
Functional groups: cOC; cC(c)=O; cnc
Chemical classification
ClassyFire Kingdom: Organic compounds
ClassyFire Superclass: Organoheterocyclic compounds
ClassyFire Class: Isoquinolines and derivatives
ClassyFire Subclass: Benzylisoquinolines
NP Classifier Biosynthetic pathway: Alkaloids
NP Classifier Superclass: Tyrosine alkaloids
NP Classifier Class: Isoquinoline alkaloids
Synonymous chemical names:
papaveraldine
External chemical identifiers:
CID:CID_96932; ChEMBL:CHEMBL205040; ChEBI:CHEBI:174754; ZINC:ZINC000001609699; FDASRS:L8825LX0F5; SureChEMBL:SCHEMBL679695; MolPort-000-881-407
Chemical structure download


Papaveraldine
Physicochemical properties
Property name Tool Property value
Molecular weight (g/mol) RDKit 353.37
Log P RDKit 3.5
Topological polar surface area (Å2) RDKit 66.88
Number of hydrogen bond acceptors RDKit 6
Number of hydrogen bond donors RDKit 0
Number of carbon atoms RDKit 20
Number of heavy atoms RDKit 26
Number of heteroatoms RDKit 6
Number of nitrogen atoms RDKit 1
Number of sulfur atoms RDKit 0
Number of chiral carbon atoms RDKit 0
Stereochemical complexity RDKit 0
Number of sp hybridized carbon atoms RDKit 0
Number of sp2 hybridized carbon atoms RDKit 16
Number of sp3 hybridized carbon atoms RDKit 4
Shape complexity RDKit 0.2
Number of rotatable bonds RDKit 6
Number of aliphatic carbocycles RDKit 0
Number of aliphatic heterocycles RDKit 0
Number of aliphatic rings RDKit 0
Number of aromatic carbocycles RDKit 2
Number of aromatic heterocycles RDKit 1
Number of aromatic rings RDKit 3
Total number of rings RDKit 3
Number of saturated carbocycles RDKit 0
Number of saturated heterocycles RDKit 0
Number of saturated rings RDKit 0
Number of Smallest Set of Smallest Rings (SSSR) RDKit 3


Papaveraldine
Drug-likeness
Property nameToolProperty value
Number of Lipinski’s rule of 5 violations RDKit 0
Lipinski’s rule of 5 filter RDKit Passed
Number of Ghose filter violations RDKit 0
Ghose filter RDKit Passed
Veber filter RDKit Good
Pfizer 3/75 filter RDKit Bad
GSK 4/400 filter RDKit Good
Weighted quantitative estimate of drug-likeness (QEDw) score RDKit 0.632032


Papaveraldine
ADME properties
Property nameToolProperty value
Bioavailability score SwissADME 0.55
Solubility class [ESOL] SwissADME Moderately soluble
Solubility class [Silicos-IT] SwissADME Poorly soluble
Blood Brain Barrier permeation SwissADME Yes
Gastrointestinal absorption SwissADME High
Log Kp (Skin permeation, cm/s) SwissADME -5.86
Number of PAINS structural alerts SwissADME 0
Number of Brenk structural alerts SwissADME 0
CYP1A2 inhibitor SwissADME Yes
CYP2C19 inhibitor SwissADME Yes
CYP2C9 inhibitor SwissADME Yes
CYP2D6 inhibitor SwissADME Yes
CYP3A4 inhibitor SwissADME Yes
P-glycoprotein substrate SwissADME No


Papaveraldine
Phytochemical - Human target proteins supported by experimental evidence associations
Human target proteins supported by experimental evidence
IMPPAT target identifierGene identifierHGNC symbolEntrez Gene identifierSource
TAR_EXP_000176ENSG00000166192SENP8123228BindingDB, ChEMBL, NPASS
TAR_EXP_000119ENSG00000101751POLI11201NPASS
TAR_EXP_000604ENSG00000112164GLP1R2740NPASS
TAR_EXP_001177ENSG00000172531PPP1CA5499BindingDB, NPASS
TAR_EXP_001188ENSG00000011485PPP5C5536BindingDB, NPASS
TAR_EXP_000881ENSG00000087085ACHE43ChEMBL, NPASS
TAR_EXP_000696ENSG00000120868APAF1317BindingDB, ChEMBL, NPASS
TAR_EXP_001293ENSG00000138468SENP757337ChEMBL, NPASS
TAR_EXP_001206ENSG00000042088TDP155775NPASS
TAR_EXP_001468ENSG00000204842ATXN26311NPASS
TAR_EXP_001663ENSG00000162607USP17398ChEMBL, NPASS
TAR_EXP_001767ENSG00000132906CASP9842BindingDB
TAR_EXP_001674ENSG00000109685NSD27468ChEMBL, NPASS
TAR_EXP_001757ENSG00000164305CASP3836BindingDB, ChEMBL, NPASS
TAR_EXP_001728ENSG00000176208ATAD579915NPASS
TAR_EXP_000614ENSG00000087460GNAS2778NPASS
TAR_EXP_000559ENSG00000185513L3MBTL126013NPASS
TAR_EXP_000561ENSG00000112701SENP626054BindingDB, ChEMBL, NPASS
TAR_EXP_001151ENSG00000170734POLH5429NPASS