IMPPAT Phytochemical information: 
Bamipine

Bamipine
Summary

SMILES: CN1CCC(CC1)N(c1ccccc1)Cc1ccccc1
InChI: InChI=1S/C19H24N2/c1-20-14-12-19(13-15-20)21(18-10-6-3-7-11-18)16-17-8-4-2-5-9-17/h2-11,19H,12-16H2,1H3
InChIKey: VZSXTYKGYWISGQ-UHFFFAOYSA-N
DeepSMILES: CNCCCCC6))Ncccccc6))))))Ccccccc6
Scaffold Graph/Node/Bond level: c1ccc(CN(c2ccccc2)C2CCNCC2)cc1
Scaffold Graph/Node level: C1CCC(CN(C2CCCCC2)C2CCNCC2)CC1
Scaffold Graph level: C1CCC(CC(C2CCCCC2)C2CCCCC2)CC1
Functional groups: CN(C)C; cN(C)C
Chemical classification
ClassyFire Kingdom: Organic compounds
ClassyFire Superclass: Benzenoids
ClassyFire Class: Benzene and substituted derivatives
ClassyFire Subclass: Phenylmethylamines
NP Classifier Biosynthetic pathway: Alkaloids
Synonymous chemical names:
piperamine
External chemical identifiers:
CID:CID_72075; ChEMBL:CHEMBL520400; ChEBI:CHEBI:135165; ZINC:ZINC000000000987; FDASRS:Y6BHZ28O92; SureChEMBL:SCHEMBL29626; MolPort-005-933-704
Chemical structure download


Bamipine
Physicochemical properties
Property name Tool Property value
Molecular weight (g/mol) RDKit 280.42
Log P RDKit 3.79
Topological polar surface area (Å2) RDKit 6.48
Number of hydrogen bond acceptors RDKit 2
Number of hydrogen bond donors RDKit 0
Number of carbon atoms RDKit 19
Number of heavy atoms RDKit 21
Number of heteroatoms RDKit 2
Number of nitrogen atoms RDKit 2
Number of sulfur atoms RDKit 0
Number of chiral carbon atoms RDKit 0
Stereochemical complexity RDKit 0
Number of sp hybridized carbon atoms RDKit 0
Number of sp2 hybridized carbon atoms RDKit 12
Number of sp3 hybridized carbon atoms RDKit 7
Shape complexity RDKit 0.37
Number of rotatable bonds RDKit 4
Number of aliphatic carbocycles RDKit 0
Number of aliphatic heterocycles RDKit 1
Number of aliphatic rings RDKit 1
Number of aromatic carbocycles RDKit 2
Number of aromatic heterocycles RDKit 0
Number of aromatic rings RDKit 2
Total number of rings RDKit 3
Number of saturated carbocycles RDKit 0
Number of saturated heterocycles RDKit 1
Number of saturated rings RDKit 1
Number of Smallest Set of Smallest Rings (SSSR) RDKit 3


Bamipine
Drug-likeness
Property nameToolProperty value
Number of Lipinski’s rule of 5 violations RDKit 0
Lipinski’s rule of 5 filter RDKit Passed
Number of Ghose filter violations RDKit 0
Ghose filter RDKit Passed
Veber filter RDKit Good
Pfizer 3/75 filter RDKit Bad
GSK 4/400 filter RDKit Good
Weighted quantitative estimate of drug-likeness (QEDw) score RDKit 0.840537


Bamipine
ADME properties
Property nameToolProperty value
Bioavailability score SwissADME 0.55
Solubility class [ESOL] SwissADME Moderately soluble
Solubility class [Silicos-IT] SwissADME Moderately soluble
Blood Brain Barrier permeation SwissADME Yes
Gastrointestinal absorption SwissADME High
Log Kp (Skin permeation, cm/s) SwissADME -5.08
Number of PAINS structural alerts SwissADME 0
Number of Brenk structural alerts SwissADME 0
CYP1A2 inhibitor SwissADME Yes
CYP2C19 inhibitor SwissADME No
CYP2C9 inhibitor SwissADME No
CYP2D6 inhibitor SwissADME Yes
CYP3A4 inhibitor SwissADME No
P-glycoprotein substrate SwissADME No


Bamipine
Phytochemical - Human target proteins supported by experimental evidence associations
Human target proteins supported by experimental evidence
IMPPAT target identifierGene identifierHGNC symbolEntrez Gene identifierSource
TAR_EXP_000786ENSG00000177606JUN3725NPASS
TAR_EXP_000966ENSG00000116044NFE2L24780NPASS