IMPPAT Phytochemical information: 
Methylnaphthazarin

Methylnaphthazarin
Summary

SMILES: CC1=CC(=O)c2c(C1=O)c(O)ccc2O
InChI: InChI=1S/C11H8O4/c1-5-4-8(14)9-6(12)2-3-7(13)10(9)11(5)15/h2-4,12-13H,1H3
InChIKey: YKPXIWHBRBFRQM-UHFFFAOYSA-N
DeepSMILES: CC=CC=O)ccC6=O))cO)ccc6O
Scaffold Graph/Node/Bond level: O=C1C=CC(=O)c2ccccc21
Scaffold Graph/Node level: OC1CCC(O)C2CCCCC12
Scaffold Graph level: CC1CCC(C)C2CCCCC12
Functional groups: CC1=CC(=O)ccC1=O; cO
Chemical classification
ClassyFire Kingdom: Organic compounds
ClassyFire Superclass: Benzenoids
ClassyFire Class: Naphthalenes
ClassyFire Subclass: Naphthoquinones
NP Classifier Biosynthetic pathway: Polyketides
NP Classifier Superclass: Naphthalenes
NP Classifier Class: Naphthoquinones
Synonymous chemical names:
2-methylnaphthazarin
External chemical identifiers:
CID:CID_271296; ChEMBL:CHEMBL11475; ZINC:ZINC000001704707; SureChEMBL:SCHEMBL10409133; MolPort-002-525-117
Chemical structure download


Methylnaphthazarin
Physicochemical properties
Property name Tool Property value
Molecular weight (g/mol) RDKit 204.18
Log P RDKit 1.42
Topological polar surface area (Å2) RDKit 74.6
Number of hydrogen bond acceptors RDKit 4
Number of hydrogen bond donors RDKit 2
Number of carbon atoms RDKit 11
Number of heavy atoms RDKit 15
Number of heteroatoms RDKit 4
Number of nitrogen atoms RDKit 0
Number of sulfur atoms RDKit 0
Number of chiral carbon atoms RDKit 0
Stereochemical complexity RDKit 0
Number of sp hybridized carbon atoms RDKit 0
Number of sp2 hybridized carbon atoms RDKit 10
Number of sp3 hybridized carbon atoms RDKit 1
Shape complexity RDKit 0.09
Number of rotatable bonds RDKit 0
Number of aliphatic carbocycles RDKit 1
Number of aliphatic heterocycles RDKit 0
Number of aliphatic rings RDKit 1
Number of aromatic carbocycles RDKit 1
Number of aromatic heterocycles RDKit 0
Number of aromatic rings RDKit 1
Total number of rings RDKit 2
Number of saturated carbocycles RDKit 0
Number of saturated heterocycles RDKit 0
Number of saturated rings RDKit 0
Number of Smallest Set of Smallest Rings (SSSR) RDKit 2


Methylnaphthazarin
Drug-likeness
Property nameToolProperty value
Number of Lipinski’s rule of 5 violations RDKit 0
Lipinski’s rule of 5 filter RDKit Passed
Number of Ghose filter violations RDKit 0
Ghose filter RDKit Passed
Veber filter RDKit Good
Pfizer 3/75 filter RDKit Bad
GSK 4/400 filter RDKit Good
Weighted quantitative estimate of drug-likeness (QEDw) score RDKit 0.626555


Methylnaphthazarin
ADME properties
Property nameToolProperty value
Bioavailability score SwissADME 0.55
Solubility class [ESOL] SwissADME Soluble
Solubility class [Silicos-IT] SwissADME Soluble
Blood Brain Barrier permeation SwissADME No
Gastrointestinal absorption SwissADME High
Log Kp (Skin permeation, cm/s) SwissADME -5.97
Number of PAINS structural alerts SwissADME 2
Number of Brenk structural alerts SwissADME 1
CYP1A2 inhibitor SwissADME Yes
CYP2C19 inhibitor SwissADME No
CYP2C9 inhibitor SwissADME No
CYP2D6 inhibitor SwissADME No
CYP3A4 inhibitor SwissADME Yes
P-glycoprotein substrate SwissADME No


Methylnaphthazarin
Phytochemical - Human target proteins supported by experimental evidence associations
Human target proteins supported by experimental evidence
IMPPAT target identifierGene identifierHGNC symbolEntrez Gene identifierSource
TAR_EXP_000411ENSG00000165092ALDH1A1216ChEMBL
TAR_EXP_000559ENSG00000185513L3MBTL126013ChEMBL
TAR_EXP_000674ENSG00000123636BAZ2B29994ChEMBL
TAR_EXP_000706ENSG00000291796APEX1328ChEMBL
TAR_EXP_001485ENSG00000197299BLM641ChEMBL
TAR_EXP_001361ENSG00000140379BCL2A1597BindingDB
TAR_EXP_000572ENSG00000108773KAT2A2648ChEMBL
TAR_EXP_000356ENSG00000114867EIF4G11981BindingDB
TAR_EXP_000662ENSG00000134184GSTM12944BindingDB
TAR_EXP_001360ENSG00000004700RECQL5965ChEMBL
TAR_EXP_001150ENSG00000070501POLB5423ChEMBL
TAR_EXP_000880ENSG00000118058KMT2A4297ChEMBL
TAR_EXP_001609ENSG00000151090THRB7068ChEMBL
TAR_EXP_001644ENSG00000198431TXNRD17296ChEMBL