IMPPAT Phytochemical information: 
1,4-Diaminobutane

1,4-Diaminobutane
Summary

SMILES: NCCCCN
InChI: InChI=1S/C4H12N2/c5-3-1-2-4-6/h1-6H2
InChIKey: KIDHWZJUCRJVML-UHFFFAOYSA-N
DeepSMILES: NCCCCN
Functional groups: CN
Chemical classification
ClassyFire Kingdom: Organic compounds
ClassyFire Superclass: Organic nitrogen compounds
ClassyFire Class: Organonitrogen compounds
ClassyFire Subclass: Amines
NP Classifier Biosynthetic pathway: Alkaloids
NP Classifier Superclass: Pseudoalkaloids|Ornithine alkaloids
NP Classifier Class: Acetate-derived alkaloids|Polyamines
Synonymous chemical names:
1,4-butanediamine, putrescine
External chemical identifiers:
CID:1045; ChEMBL:CHEMBL46257; ChEBI:17148; ZINC:ZINC000005828633; FDASRS:V10TVZ52E4; SureChEMBL:SCHEMBL21642; MolPort-001-781-809
Chemical structure download


1,4-Diaminobutane
Physicochemical properties
Property name Tool Property value
Molecular weight (g/mol) RDKit 88.15
Log P RDKit -0.32
Topological polar surface area (Å2) RDKit 52.04
Number of hydrogen bond acceptors RDKit 2
Number of hydrogen bond donors RDKit 2
Number of carbon atoms RDKit 4
Number of heavy atoms RDKit 6
Number of heteroatoms RDKit 2
Number of nitrogen atoms RDKit 2
Number of sulfur atoms RDKit 0
Number of chiral carbon atoms RDKit 0
Stereochemical complexity RDKit 0
Number of sp hybridized carbon atoms RDKit 0
Number of sp2 hybridized carbon atoms RDKit 0
Number of sp3 hybridized carbon atoms RDKit 4
Shape complexity RDKit 1
Number of rotatable bonds RDKit 3
Number of aliphatic carbocycles RDKit 0
Number of aliphatic heterocycles RDKit 0
Number of aliphatic rings RDKit 0
Number of aromatic carbocycles RDKit 0
Number of aromatic heterocycles RDKit 0
Number of aromatic rings RDKit 0
Total number of rings RDKit 0
Number of saturated carbocycles RDKit 0
Number of saturated heterocycles RDKit 0
Number of saturated rings RDKit 0
Number of Smallest Set of Smallest Rings (SSSR) RDKit 0


1,4-Diaminobutane
Drug-likeness properties
Property nameToolProperty value
Number of Lipinski’s rule of 5 violations RDKit 0
Lipinski’s rule of 5 filter RDKit Passed
Number of Ghose filter violations RDKit 3
Ghose filter RDKit Failed
Veber filter RDKit Good
Pfizer 3/75 filter RDKit Bad
GSK 4/400 filter RDKit Good
Weighted quantitative estimate of drug-likeness (QEDw) score RDKit 0.4646


1,4-Diaminobutane
ADMET properties
Property nameToolProperty value
Bioavailability score SwissADME 0.55
Solubility class [ESOL] SwissADME Highly soluble
Solubility class [Silicos-IT] SwissADME Soluble
Blood Brain Barrier permeation SwissADME No
Gastrointestinal absorption SwissADME High
Log Kp (Skin permeation, cm/s) SwissADME -7.33
Number of PAINS structural alerts SwissADME 0.0
Number of Brenk structural alerts SwissADME 0.0
CYP1A2 inhibitor SwissADME No
CYP2C19 inhibitor SwissADME No
CYP2C9 inhibitor SwissADME No
CYP2D6 inhibitor SwissADME No
CYP3A4 inhibitor SwissADME No
P-glycoprotein substrate SwissADME No


1,4-Diaminobutane
Predicted human target proteins
Protein identifierHGNC symbolCombined score from STITCH database
ENSP00000233809IGFBP2800
ENSP00000234111ODC1999
ENSP00000269298SAT2949
ENSP00000278060PAOX989
ENSP00000294517ADC981
ENSP00000312326AOC3944
ENSP00000321507AZIN1797
ENSP00000337915CYP3A4800
ENSP00000354193AOC1964
ENSP00000355920SLC22A2800
ENSP00000357880AMD1999
ENSP00000364986AGMAT914
ENSP00000366156SRM994
ENSP00000368572SAT1987
ENSP00000385746SMS956
ENSP00000464146OAZ1761
The human target proteins were predicted using STITCH, a database of Chemical-Protein interaction networks.