IMPPAT Phytochemical information: 
Pelankine
Pelankine
Summary

SMILES: C/C=C/1CN2CCC34C(C1CCC23N(C)c1c4cc2c(c1)c1c(o2)cc2c(c1)C13CCN4C(C1N2C)CC(C3C(=O)OC)C1(C4)OC1C)C(=O)OC
InChI: InChI=1S/C42H48N4O6/c1-7-22-19-46-13-11-40-27-17-32-25(15-30(27)44(4)42(40,46)9-8-23(22)34(40)37(47)49-5)24-14-26-29(18-33(24)51-32)43(3)36-31-16-28-35(38(48)50-6)39(26,36)10-12-45(31)20-41(28)21(2)52-41/h7,14-15,17-18,21,23,28,31,34-36H,8-13,16,19-20H2,1-6H3/b22-7+
InChIKey: GCALWROHTSRPCZ-QPJQQBGISA-N
DeepSMILES: C/C=CCNCCCCC8CCC96NC)cc9cccc6)cco5)cccc6)CCCNCC6N9C)))CCC8C=O)OC))))CC6)OC3C))))))))))))))))))))))))))C=O)OC
Scaffold Graph/Node/Bond level: C=C1CN2CCC34CC1CCC23Nc1cc2c(cc14)oc1cc3c(cc12)C12CCN4CC5(CO5)C(CC4C1N3)C2
Scaffold Graph/Node level: CC1CN2CCC34CC1CCC23NC1CC2C(CC14)OC1CC3NC4C5CC6CC4(CCN5CC64CO4)C3CC12
Scaffold Graph level: CC1CC2CCC34CC1CCC23CC1CC2C(CC3CC5CC6C7CC8CC6(CCC7CC86CC6)C5CC32)CC14
Functional groups: C/C=C(/C)C; CC1OC1(C)C; CN(C)C; COC(C)=O; cN(C)C; cN(C)C(C)(C)N(C)C; coc
Chemical classification
ClassyFire Kingdom: Organic compounds
ClassyFire Superclass: Organoheterocyclic compounds
ClassyFire Class: Indoles and derivatives
ClassyFire Subclass: Pyridoindoles
NP Classifier Biosynthetic pathway: Alkaloids
NP Classifier Superclass: Tryptophan alkaloids
NP Classifier Class: Aspidosperma type
Synonymous chemical names:
pelankine
External chemical identifiers:
CID:102079780
Chemical structure download
2D:2D MOL2D MOL22D SDF
3D:3D MOL3D MOL23D SDF3D PDB3D PDBQT
Pelankine
Physicochemical properties
Property name Tool Property value
Molecular weight (g/mol) RDKit 704.87
Log P RDKit 4.95
Topological polar surface area (Å2) RDKit 91.23
Number of hydrogen bond acceptors RDKit 10
Number of hydrogen bond donors RDKit 0
Number of carbon atoms RDKit 42
Number of heavy atoms RDKit 52
Number of heteroatoms RDKit 10
Number of nitrogen atoms RDKit 4
Number of sulfur atoms RDKit 0
Number of chiral carbon atoms RDKit 11
Stereochemical complexity RDKit 0.26
Number of sp hybridized carbon atoms RDKit 0
Number of sp2 hybridized carbon atoms RDKit 16
Number of sp3 hybridized carbon atoms RDKit 26
Shape complexity RDKit 0.62
Number of rotatable bonds RDKit 4
Number of aliphatic carbocycles RDKit 2
Number of aliphatic heterocycles RDKit 8
Number of aliphatic rings RDKit 10
Number of aromatic carbocycles RDKit 2
Number of aromatic heterocycles RDKit 1
Number of aromatic rings RDKit 3
Total number of rings RDKit 13
Number of saturated carbocycles RDKit 2
Number of saturated heterocycles RDKit 6
Number of saturated rings RDKit 8
Number of Smallest Set of Smallest Rings (SSSR) RDKit 13
Pelankine
Drug-likeness properties
Property nameToolProperty value
Number of Lipinski’s rule of 5 violations RDKit 1
Lipinski’s rule of 5 filter RDKit Passed
Number of Ghose filter violations RDKit 3
Ghose filter RDKit Failed
Veber filter RDKit Good
Pfizer 3/75 filter RDKit Bad
GSK 4/400 filter RDKit Bad
Weighted quantitative estimate of drug-likeness (QEDw) score RDKit 0.2076
Pelankine
ADMET properties
Property nameToolProperty value
Bioavailability score SwissADME 0.55
Solubility class [ESOL] SwissADME Poorly soluble
Solubility class [Silicos-IT] SwissADME Poorly soluble
Blood Brain Barrier permeation SwissADME No
Gastrointestinal absorption SwissADME High
Log Kp (Skin permeation, cm/s) SwissADME -7.28
Number of PAINS structural alerts SwissADME 0.0
Number of Brenk structural alerts SwissADME 3.0
CYP1A2 inhibitor SwissADME No
CYP2C19 inhibitor SwissADME No
CYP2C9 inhibitor SwissADME No
CYP2D6 inhibitor SwissADME No
CYP3A4 inhibitor SwissADME No
P-glycoprotein substrate SwissADME Yes