IMPPAT Phytochemical information: 
Neocrocin A

Neocrocin A
Summary

SMILES: OC[C@H]1O[C@@H](OC[C@H]2OC(O)[C@@H]([C@H]([C@@H]2O)O)OC(=O)/C=C/C=C/C=C/C=C/C=C/C=C/C=C/C(=O)O[C@@H]2O[C@H](CO[C@@H]3O[C@H](CO)[C@H]([C@@H]([C@H]3O)O)O)[C@H]([C@@H]([C@H]2O)O)O)[C@@H]([C@H]([C@@H]1O)O)O
InChI: InChI=1S/C40H56O24/c41-15-19-25(45)29(49)33(53)38(60-19)57-17-21-28(48)32(52)36(37(56)59-21)63-23(43)13-11-9-7-5-3-1-2-4-6-8-10-12-14-24(44)64-40-35(55)31(51)27(47)22(62-40)18-58-39-34(54)30(50)26(46)20(16-42)61-39/h1-14,19-22,25-42,45-56H,15-18H2/b2-1+,5-3+,6-4+,9-7+,10-8+,13-11+,14-12+/t19-,20-,21-,22-,25-,26-,27-,28-,29+,30+,31+,32+,33-,34-,35-,36-,37?,38-,39-,40+/m1/s1
InChIKey: ZAYITCVWWYYROQ-RGISSLMQSA-N
DeepSMILES: OC[C@H]O[C@@H]OC[C@H]OCO)[C@@H][C@H][C@@H]6O))O))OC=O)/C=C/C=C/C=C/C=C/C=C/C=C/C=C/C=O)O[C@@H]O[C@H]CO[C@@H]O[C@H]CO))[C@H][C@@H][C@H]6O))O))O)))))))[C@H][C@@H][C@H]6O))O))O)))))))))))))))))))))))))))))[C@@H][C@H][C@@H]6O))O))O
Scaffold Graph/Node/Bond level: O=C(C=CC=CC=CC=CC=CC=CC=CC(=O)OC1CCCC(COC2CCCCO2)O1)OC1CCC(COC2CCCCO2)OC1
Scaffold Graph/Node level: OC(CCCCCCCCCCCCCCC(O)OC1CCCC(COC2CCCCO2)O1)OC1CCC(COC2CCCCO2)OC1
Scaffold Graph level: CC(CCCCCCCCCCCCCCC(C)CC1CCCC(CCC2CCCCC2)C1)CC1CCC(CCC2CCCCC2)CC1
Functional groups: CO; COC(=O)/C=C/C=C/C=C/C=C/C=C/C=C/C=C/C(=O)O[C@@H](C)OC; COC(C)O; CO[C@@H](C)OC
Chemical classification
ClassyFire Kingdom: Organic compounds
ClassyFire Superclass: Lipids and lipid-like molecules
ClassyFire Class: Saccharolipids
NP Classifier Biosynthetic pathway: Polyketides
NP Classifier Superclass: Linear polyketides
NP Classifier Class: 3-oligoenoyltetramic acids
Synonymous chemical names:
neocrocin
External chemical identifiers:
CID:101439411
Chemical structure download


Neocrocin A
Physicochemical properties
Property name Tool Property value
Molecular weight (g/mol) RDKit 920.86
Log P RDKit -6.79
Topological polar surface area (Å2) RDKit 391.2
Number of hydrogen bond acceptors RDKit 24
Number of hydrogen bond donors RDKit 14
Number of carbon atoms RDKit 40
Number of heavy atoms RDKit 64
Number of heteroatoms RDKit 24
Number of nitrogen atoms RDKit 0
Number of sulfur atoms RDKit 0
Number of chiral carbon atoms RDKit 20
Stereochemical complexity RDKit 0.5
Number of sp hybridized carbon atoms RDKit 0
Number of sp2 hybridized carbon atoms RDKit 16
Number of sp3 hybridized carbon atoms RDKit 24
Shape complexity RDKit 0.6
Number of rotatable bonds RDKit 20
Number of aliphatic carbocycles RDKit 0
Number of aliphatic heterocycles RDKit 4
Number of aliphatic rings RDKit 4
Number of aromatic carbocycles RDKit 0
Number of aromatic heterocycles RDKit 0
Number of aromatic rings RDKit 0
Total number of rings RDKit 4
Number of saturated carbocycles RDKit 0
Number of saturated heterocycles RDKit 4
Number of saturated rings RDKit 4
Number of Smallest Set of Smallest Rings (SSSR) RDKit 4


Neocrocin A
Drug-likeness properties
Property nameToolProperty value
Number of Lipinski’s rule of 5 violations RDKit 3
Lipinski’s rule of 5 filter RDKit Failed
Number of Ghose filter violations RDKit 4
Ghose filter RDKit Failed
Veber filter RDKit Bad
Pfizer 3/75 filter RDKit Good
GSK 4/400 filter RDKit Bad
Weighted quantitative estimate of drug-likeness (QEDw) score RDKit 0.0345