IMPPAT Phytochemical information: 
Liriodenine

Liriodenine
Summary

SMILES: O=C1c2ccccc2-c2c3c1nccc3cc1c2OCO1
InChI: InChI=1S/C17H9NO3/c19-16-11-4-2-1-3-10(11)14-13-9(5-6-18-15(13)16)7-12-17(14)21-8-20-12/h1-7H,8H2
InChIKey: MUMCCPUVOAUBAN-UHFFFAOYSA-N
DeepSMILES: O=Ccccccc6-ccc%10nccc6ccc%10OCO5
Scaffold Graph/Node/Bond level: O=C1c2ccccc2-c2c3c(cc4ccnc1c24)OCO3
Scaffold Graph/Node level: OC1C2CCCCC2C2C3OCOC3CC3CCNC1C32
Scaffold Graph level: CC1C2CCCCC2C2C3CCCC3CC3CCCC1C32
Functional groups: c1cOCO1; cC(c)=O; cnc
Chemical classification
ClassyFire Kingdom: Organic compounds
ClassyFire Superclass: Alkaloids and derivatives
ClassyFire Class: Aporphines
NP Classifier Biosynthetic pathway: Alkaloids
NP Classifier Superclass: Tyrosine alkaloids
NP Classifier Class: Aporphine alkaloids|Isoquinoline alkaloids
Synonymous chemical names:
liriodenine, oxoushinsuine (liriodenine), oxoushinsunine
External chemical identifiers:
CID:10144; ChEMBL:CHEMBL37736; ChEBI:70649; ZINC:ZINC000000006256; FDASRS:E134R7X4O9; SureChEMBL:SCHEMBL165803; MolPort-005-981-187
Chemical structure download


Liriodenine
Physicochemical properties
Property name Tool Property value
Molecular weight (g/mol) RDKit 275.26
Log P RDKit 3.17
Topological polar surface area (Å2) RDKit 48.42
Number of hydrogen bond acceptors RDKit 4
Number of hydrogen bond donors RDKit 0
Number of carbon atoms RDKit 17
Number of heavy atoms RDKit 21
Number of heteroatoms RDKit 4
Number of nitrogen atoms RDKit 1
Number of sulfur atoms RDKit 0
Number of chiral carbon atoms RDKit 0
Stereochemical complexity RDKit 0
Number of sp hybridized carbon atoms RDKit 0
Number of sp2 hybridized carbon atoms RDKit 16
Number of sp3 hybridized carbon atoms RDKit 1
Shape complexity RDKit 0.06
Number of rotatable bonds RDKit 0
Number of aliphatic carbocycles RDKit 1
Number of aliphatic heterocycles RDKit 1
Number of aliphatic rings RDKit 2
Number of aromatic carbocycles RDKit 2
Number of aromatic heterocycles RDKit 1
Number of aromatic rings RDKit 3
Total number of rings RDKit 5
Number of saturated carbocycles RDKit 0
Number of saturated heterocycles RDKit 0
Number of saturated rings RDKit 0
Number of Smallest Set of Smallest Rings (SSSR) RDKit 5


Liriodenine
Drug-likeness properties
Property nameToolProperty value
Number of Lipinski’s rule of 5 violations RDKit 0
Lipinski’s rule of 5 filter RDKit Passed
Number of Ghose filter violations RDKit 0
Ghose filter RDKit Passed
Veber filter RDKit Good
Pfizer 3/75 filter RDKit Bad
GSK 4/400 filter RDKit Good
Weighted quantitative estimate of drug-likeness (QEDw) score RDKit 0.4943


Liriodenine
ADMET properties
Property nameToolProperty value
Bioavailability score SwissADME 0.55
Solubility class [ESOL] SwissADME Moderately soluble
Solubility class [Silicos-IT] SwissADME Poorly soluble
Blood Brain Barrier permeation SwissADME Yes
Gastrointestinal absorption SwissADME High
Log Kp (Skin permeation, cm/s) SwissADME -5.57
Number of PAINS structural alerts SwissADME 0.0
Number of Brenk structural alerts SwissADME 0.0
CYP1A2 inhibitor SwissADME Yes
CYP2C19 inhibitor SwissADME No
CYP2C9 inhibitor SwissADME No
CYP2D6 inhibitor SwissADME No
CYP3A4 inhibitor SwissADME Yes
P-glycoprotein substrate SwissADME Yes


Liriodenine
Predicted human target proteins
Protein identifierHGNC symbolCombined score from STITCH database
ENSP00000255380CHRM3800
ENSP00000269305TP53800
The human target proteins were predicted using STITCH, a database of Chemical-Protein interaction networks.