IMPPAT Phytochemical information: 
Palmitoleic acid

Palmitoleic acid
Summary

SMILES: CCCCCC/C=CCCCCCCCC(=O)O
InChI: InChI=1S/C16H30O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16(17)18/h7-8H,2-6,9-15H2,1H3,(H,17,18)/b8-7-
InChIKey: SECPZKHBENQXJG-FPLPWBNLSA-N
DeepSMILES: CCCCCC/C=CCCCCCCCC=O)O
Functional groups: C/C=CC; CC(=O)O
Chemical classification
ClassyFire Kingdom: Organic compounds
ClassyFire Superclass: Lipids and lipid-like molecules
ClassyFire Class: Fatty Acyls
ClassyFire Subclass: Fatty acids and conjugates
NP Classifier Biosynthetic pathway: Fatty acids
NP Classifier Superclass: Fatty Acids and Conjugates
NP Classifier Class: Unsaturated fatty acids
Synonymous chemical names:
(z)-9-hexadecenoic acid (syn. palmitoleic acid), (z)-hexadec-9-enoic acid, 9-hexadecenoic acid (cas), cis-9-hexadecenoic acid, cis-hexadec-9-enoic acid, palmistoleic acid, palmitileic acid, palmitoleic, palmitoleic acid, palmitoleic acid (c16_1), palmitoleic-acid
External chemical identifiers:
CID:445638; ChEMBL:CHEMBL453509; ChEBI:28716; ZINC:ZINC000008221009; FDASRS:209B6YPZ4I; SureChEMBL:SCHEMBL33310; MolPort-001-740-137
Chemical structure download


Palmitoleic acid
Physicochemical properties
Property name Tool Property value
Molecular weight (g/mol) RDKit 254.41
Log P RDKit 5.33
Topological polar surface area (Å2) RDKit 37.3
Number of hydrogen bond acceptors RDKit 1
Number of hydrogen bond donors RDKit 1
Number of carbon atoms RDKit 16
Number of heavy atoms RDKit 18
Number of heteroatoms RDKit 2
Number of nitrogen atoms RDKit 0
Number of sulfur atoms RDKit 0
Number of chiral carbon atoms RDKit 0
Stereochemical complexity RDKit 0
Number of sp hybridized carbon atoms RDKit 0
Number of sp2 hybridized carbon atoms RDKit 3
Number of sp3 hybridized carbon atoms RDKit 13
Shape complexity RDKit 0.81
Number of rotatable bonds RDKit 13
Number of aliphatic carbocycles RDKit 0
Number of aliphatic heterocycles RDKit 0
Number of aliphatic rings RDKit 0
Number of aromatic carbocycles RDKit 0
Number of aromatic heterocycles RDKit 0
Number of aromatic rings RDKit 0
Total number of rings RDKit 0
Number of saturated carbocycles RDKit 0
Number of saturated heterocycles RDKit 0
Number of saturated rings RDKit 0
Number of Smallest Set of Smallest Rings (SSSR) RDKit 0


Palmitoleic acid
Drug-likeness properties
Property nameToolProperty value
Number of Lipinski’s rule of 5 violations RDKit 1
Lipinski’s rule of 5 filter RDKit Passed
Number of Ghose filter violations RDKit 0
Ghose filter RDKit Passed
Veber filter RDKit Bad
Pfizer 3/75 filter RDKit Bad
GSK 4/400 filter RDKit Bad
Weighted quantitative estimate of drug-likeness (QEDw) score RDKit 0.3562


Palmitoleic acid
ADMET properties
Property nameToolProperty value
Bioavailability score SwissADME 0.85
Solubility class [ESOL] SwissADME Moderately soluble
Solubility class [Silicos-IT] SwissADME Moderately soluble
Blood Brain Barrier permeation SwissADME Yes
Gastrointestinal absorption SwissADME High
Log Kp (Skin permeation, cm/s) SwissADME -3.18
Number of PAINS structural alerts SwissADME 0.0
Number of Brenk structural alerts SwissADME 1.0
CYP1A2 inhibitor SwissADME Yes
CYP2C19 inhibitor SwissADME No
CYP2C9 inhibitor SwissADME Yes
CYP2D6 inhibitor SwissADME No
CYP3A4 inhibitor SwissADME No
P-glycoprotein substrate SwissADME No


Palmitoleic acid
Predicted human target proteins
Protein identifierHGNC symbolCombined score from STITCH database
ENSP00000292596LTC4S800
ENSP00000308024PCSK1900
ENSP00000316329SCD5801
ENSP00000320935SLC2A4806
ENSP00000348069SREBF1865
ENSP00000354607FZD5742
ENSP00000359380SCD825
ENSP00000360538FFAR4911
ENSP00000363826FZD8742
ENSP00000367462OLAH814
ENSP00000387662GCG900
The human target proteins were predicted using STITCH, a database of Chemical-Protein interaction networks.