IMPPAT | IMPPAT: Indian Medicinal Plants, Phytochemistry And Therapeutics

1-[(23S)-24-methyl-5,7,18,20-tetraoxa-24-azahexacyclo[11.11.0.02,10.04,8.014,22.017,21]tetracosa-1(13),2,4(8),9,11,14(22),15,17(21)-octaen-23-yl]-3-[(23R)-24-methyl-5,7,18,20-tetraoxa-24-azahexacyclo[11.11.0.02,10.04,8.014,22.017,21]tetracosa-1(13),2,4(8),9,11,14(22),15,17(21)-octaen-23-yl]propan-2-one

Summary

SMILES: O=C(C[C@@H]1c2c3OCOc3ccc2-c2c(N1C)c1cc3OCOc3cc1cc2)C[C@H]1c2c3OCOc3ccc2-c2c(N1C)c1cc3OCOc3cc1cc2
InChI: InChI=1S/C43H32N2O9/c1-44-30(38-24(7-9-32-42(38)53-19-47-32)26-5-3-21-11-34-36(51-17-49-34)15-28(21)40(26)44)13-23(46)14-31-39-25(8-10-33-43(39)54-20-48-33)27-6-4-22-12-35-37(52-18-50-35)16-29(22)41(27)45(31)2/h3-12,15-16,30-31H,13-14,17-20H2,1-2H3/t30-,31+
InChIKey: NIQFOSSBJJDEES-QRRGNZNSSA-N
DeepSMILES: O=CC[C@@H]ccOCOc5ccc9-ccN%13C))cccOCOc5cc9cc%13))))))))))))))))))))))))C[C@H]ccOCOc5ccc9-ccN%13C))cccOCOc5cc9cc%13
Scaffold Graph/Node/Bond level: O=C(CC1Nc2c(ccc3cc4c(cc23)OCO4)-c2ccc3c(c21)OCO3)CC1Nc2c(ccc3cc4c(cc23)OCO4)-c2ccc3c(c21)OCO3
Scaffold Graph/Node level: OC(CC1NC2C3CC4OCOC4CC3CCC2C2CCC3OCOC3C12)CC1NC2C3CC4OCOC4CC3CCC2C2CCC3OCOC3C12
Scaffold Graph level: CC(CC1CC2C3CC4CCCC4CC3CCC2C2CCC3CCCC3C12)CC1CC2C3CC4CCCC4CC3CCC2C2CCC3CCCC3C12
Functional groups: CC(C)=O; c1cOCO1; cN(C)C

Chemical classification

ClassyFire Kingdom: Organic compounds
ClassyFire Superclass: Alkaloids and derivatives
ClassyFire Class: Benzophenanthridine alkaloids
ClassyFire Subclass: Dihydrobenzophenanthridine alkaloids
NP Classifier Biosynthetic pathway: Alkaloids
NP Classifier Superclass: Tyrosine alkaloids
NP Classifier Class: Isoquinoline alkaloids

Synonymous chemical names:
chelidimerine

External chemical identifiers:
CID:CID_101609540

Chemical structure download

2D:2D MOL2D MOL22D SDF
3D:3D MOL3D MOL23D SDF3D PDB3D PDBQT

Physicochemical properties

Property name	Tool	Property value
Molecular weight (g/mol)	RDKit	720.73
Log P	RDKit	8.27
Topological polar surface area (Å²)	RDKit	97.39
Number of hydrogen bond acceptors	RDKit	11
Number of hydrogen bond donors	RDKit	0
Number of carbon atoms	RDKit	43
Number of heavy atoms	RDKit	54
Number of heteroatoms	RDKit	11
Number of nitrogen atoms	RDKit	2
Number of sulfur atoms	RDKit	0
Number of chiral carbon atoms	RDKit	2
Stereochemical complexity	RDKit	0.05
Number of sp hybridized carbon atoms	RDKit	0
Number of sp² hybridized carbon atoms	RDKit	33
Number of sp³ hybridized carbon atoms	RDKit	10
Shape complexity	RDKit	0.23
Number of rotatable bonds	RDKit	4
Number of aliphatic carbocycles	RDKit	0
Number of aliphatic heterocycles	RDKit	6
Number of aliphatic rings	RDKit	6
Number of aromatic carbocycles	RDKit	6
Number of aromatic heterocycles	RDKit	0
Number of aromatic rings	RDKit	6
Total number of rings	RDKit	12
Number of saturated carbocycles	RDKit	0
Number of saturated heterocycles	RDKit	0
Number of saturated rings	RDKit	0
Number of Smallest Set of Smallest Rings (SSSR)	RDKit	12

Drug-likeness properties

Property name	Tool	Property value
Number of Lipinski’s rule of 5 violations	RDKit	3
Lipinski’s rule of 5 filter	RDKit	Failed
Number of Ghose filter violations	RDKit	4
Ghose filter	RDKit	Failed
Veber filter	RDKit	Good
Pfizer 3/75 filter	RDKit	Bad
GSK 4/400 filter	RDKit	Bad
Weighted quantitative estimate of drug-likeness (QEDw) score	RDKit	0.176098

ADME properties

Property name	Tool	Property value
Bioavailability score	SwissADME	0.17
Solubility class [ESOL]	SwissADME	Poorly soluble
Solubility class [Silicos-IT]	SwissADME	Insoluble
Blood Brain Barrier permeation	SwissADME	No
Gastrointestinal absorption	SwissADME	Low
Log K_p (Skin permeation, cm/s)	SwissADME	-5.25
Number of PAINS structural alerts	SwissADME	0
Number of Brenk structural alerts	SwissADME	0
CYP1A2 inhibitor	SwissADME	No
CYP2C19 inhibitor	SwissADME	No
CYP2C9 inhibitor	SwissADME	No
CYP2D6 inhibitor	SwissADME	No
CYP3A4 inhibitor	SwissADME	Yes
P-glycoprotein substrate	SwissADME	Yes