IMPPAT Phytochemical information: 
nobilin E

nobilin E
Summary

SMILES: COc1cccc(c1)CCc1cc(OC)c(c2c1C(Cc1cccc(c1)OC)c1c(O2)c(OC)c(c(c1)O)O)O
InChI: InChI=1S/C32H32O8/c1-36-21-9-5-7-18(13-21)11-12-20-16-26(38-3)29(35)31-27(20)23(15-19-8-6-10-22(14-19)37-2)24-17-25(33)28(34)32(39-4)30(24)40-31/h5-10,13-14,16-17,23,33-35H,11-12,15H2,1-4H3
InChIKey: DIJWWMHOMAEIJB-UHFFFAOYSA-N
DeepSMILES: COcccccc6)CCcccOC))ccc6CCcccccc6)OC))))))))ccO6)cOC))ccc6)O))O))))))))O
Scaffold Graph/Node/Bond level: c1ccc(CCc2cccc3c2C(Cc2ccccc2)c2ccccc2O3)cc1
Scaffold Graph/Node level: C1CCC(CCC2CCCC3OC4CCCCC4C(CC4CCCCC4)C23)CC1
Scaffold Graph level: C1CCC(CCC2CCCC3CC4CCCCC4C(CC4CCCCC4)C23)CC1
Functional groups: cOC; cO; cOc
Chemical classification
ClassyFire Kingdom: Organic compounds
ClassyFire Superclass: Organoheterocyclic compounds
ClassyFire Class: Benzopyrans
ClassyFire Subclass: 1-benzopyrans
NP Classifier Biosynthetic pathway: Shikimates and Phenylpropanoids
NP Classifier Superclass: Stilbenoids|Lignans
NP Classifier Class: Stilbenolignans
Synonymous chemical names:
nobilin e
External chemical identifiers:
CID:CID_16104872; ChEMBL:CHEMBL219101
Chemical structure download


nobilin E
Physicochemical properties
Property name Tool Property value
Molecular weight (g/mol) RDKit 544.6
Log P RDKit 6.1
Topological polar surface area (Å2) RDKit 106.84
Number of hydrogen bond acceptors RDKit 8
Number of hydrogen bond donors RDKit 3
Number of carbon atoms RDKit 32
Number of heavy atoms RDKit 40
Number of heteroatoms RDKit 8
Number of nitrogen atoms RDKit 0
Number of sulfur atoms RDKit 0
Number of chiral carbon atoms RDKit 1
Stereochemical complexity RDKit 0.03
Number of sp hybridized carbon atoms RDKit 0
Number of sp2 hybridized carbon atoms RDKit 24
Number of sp3 hybridized carbon atoms RDKit 8
Shape complexity RDKit 0.25
Number of rotatable bonds RDKit 9
Number of aliphatic carbocycles RDKit 0
Number of aliphatic heterocycles RDKit 1
Number of aliphatic rings RDKit 1
Number of aromatic carbocycles RDKit 4
Number of aromatic heterocycles RDKit 0
Number of aromatic rings RDKit 4
Total number of rings RDKit 5
Number of saturated carbocycles RDKit 0
Number of saturated heterocycles RDKit 0
Number of saturated rings RDKit 0
Number of Smallest Set of Smallest Rings (SSSR) RDKit 5


nobilin E
Drug-likeness properties
Property nameToolProperty value
Number of Lipinski’s rule of 5 violations RDKit 2
Lipinski’s rule of 5 filter RDKit Failed
Number of Ghose filter violations RDKit 4
Ghose filter RDKit Failed
Veber filter RDKit Good
Pfizer 3/75 filter RDKit Bad
GSK 4/400 filter RDKit Bad
Weighted quantitative estimate of drug-likeness (QEDw) score RDKit 0.217023


nobilin E
ADME properties
Property nameToolProperty value
Bioavailability score SwissADME 0.55
Solubility class [ESOL] SwissADME Poorly soluble
Solubility class [Silicos-IT] SwissADME Poorly soluble
Blood Brain Barrier permeation SwissADME No
Gastrointestinal absorption SwissADME Low
Log Kp (Skin permeation, cm/s) SwissADME -5.20
Number of PAINS structural alerts SwissADME 1
Number of Brenk structural alerts SwissADME 1
CYP1A2 inhibitor SwissADME No
CYP2C19 inhibitor SwissADME No
CYP2C9 inhibitor SwissADME No
CYP2D6 inhibitor SwissADME No
CYP3A4 inhibitor SwissADME No
P-glycoprotein substrate SwissADME Yes