IMPPAT Phytochemical information: 
Marstenacigenin B

Marstenacigenin B
Summary

SMILES: O[C@H]1CC[C@]2([C@H](C1)CC[C@@]1([C@@H]2C[C@@H](OC(=O)c2ccccc2)[C@]2([C@]1(O)CC[C@@]2(O)[C@@H](OC(=O)c1ccccc1)C)C)O)C
InChI: InChI=1S/C35H44O8/c1-22(42-29(37)23-10-6-4-7-11-23)33(39)18-19-35(41)32(33,3)28(43-30(38)24-12-8-5-9-13-24)21-27-31(2)16-15-26(36)20-25(31)14-17-34(27,35)40/h4-13,22,25-28,36,39-41H,14-21H2,1-3H3/t22-,25-,26-,27+,28+,31-,32+,33+,34-,35+/m0/s1
InChIKey: NKZMHZRTSMJERA-RXXPBTNOSA-N
DeepSMILES: O[C@H]CC[C@][C@H]C6)CC[C@@][C@@H]6C[C@@H]OC=O)cccccc6))))))))[C@][C@]6O)CC[C@@]5O)[C@@H]OC=O)cccccc6))))))))C))))))C)))))O)))))C
Scaffold Graph/Node/Bond level: O=C(OCC1CCC2C3CCC4CCCCC4C3CC(OC(=O)c3ccccc3)C12)c1ccccc1
Scaffold Graph/Node level: OC(OCC1CCC2C3CCC4CCCCC4C3CC(OC(O)C3CCCCC3)C12)C1CCCCC1
Scaffold Graph level: CC(CCC1CCC2C3CCC4CCCCC4C3CC(CC(C)C3CCCCC3)C12)C1CCCCC1
Functional groups: CO; cC(=O)OC
Chemical classification
ClassyFire Kingdom: Organic compounds
ClassyFire Superclass: Lipids and lipid-like molecules
ClassyFire Class: Steroids and steroid derivatives
ClassyFire Subclass: Pregnane steroids
NP Classifier Biosynthetic pathway: Terpenoids
NP Classifier Superclass: Steroids
NP Classifier Class: Pregnane steroids
Synonymous chemical names:
marstenacigenin b
External chemical identifiers:
CID:CID_101694475; ZINC:ZINC000255246528
Chemical structure download


Marstenacigenin B
Physicochemical properties
Property name Tool Property value
Molecular weight (g/mol) RDKit 592.73
Log P RDKit 4.43
Topological polar surface area (Å2) RDKit 133.52
Number of hydrogen bond acceptors RDKit 8
Number of hydrogen bond donors RDKit 4
Number of carbon atoms RDKit 35
Number of heavy atoms RDKit 43
Number of heteroatoms RDKit 8
Number of nitrogen atoms RDKit 0
Number of sulfur atoms RDKit 0
Number of chiral carbon atoms RDKit 10
Stereochemical complexity RDKit 0.29
Number of sp hybridized carbon atoms RDKit 0
Number of sp2 hybridized carbon atoms RDKit 14
Number of sp3 hybridized carbon atoms RDKit 21
Shape complexity RDKit 0.6
Number of rotatable bonds RDKit 7
Number of aliphatic carbocycles RDKit 4
Number of aliphatic heterocycles RDKit 0
Number of aliphatic rings RDKit 4
Number of aromatic carbocycles RDKit 2
Number of aromatic heterocycles RDKit 0
Number of aromatic rings RDKit 2
Total number of rings RDKit 6
Number of saturated carbocycles RDKit 4
Number of saturated heterocycles RDKit 0
Number of saturated rings RDKit 4
Number of Smallest Set of Smallest Rings (SSSR) RDKit 6


Marstenacigenin B
Drug-likeness properties
Property nameToolProperty value
Number of Lipinski’s rule of 5 violations RDKit 1
Lipinski’s rule of 5 filter RDKit Passed
Number of Ghose filter violations RDKit 3
Ghose filter RDKit Failed
Veber filter RDKit Good
Pfizer 3/75 filter RDKit Bad
GSK 4/400 filter RDKit Bad
Weighted quantitative estimate of drug-likeness (QEDw) score RDKit 0.374985


Marstenacigenin B
ADME properties
Property nameToolProperty value
Bioavailability score SwissADME 0.55
Solubility class [ESOL] SwissADME Poorly soluble
Solubility class [Silicos-IT] SwissADME Poorly soluble
Blood Brain Barrier permeation SwissADME No
Gastrointestinal absorption SwissADME Low
Log Kp (Skin permeation, cm/s) SwissADME -6.66
Number of PAINS structural alerts SwissADME 0
Number of Brenk structural alerts SwissADME 1
CYP1A2 inhibitor SwissADME No
CYP2C19 inhibitor SwissADME No
CYP2C9 inhibitor SwissADME No
CYP2D6 inhibitor SwissADME No
CYP3A4 inhibitor SwissADME Yes
P-glycoprotein substrate SwissADME Yes