IMPPAT Phytochemical information: 
Zardaverine

Zardaverine
Summary

SMILES: COc1cc(ccc1OC(F)F)c1ccc(=O)[nH]n1
InChI: InChI=1S/C12H10F2N2O3/c1-18-10-6-7(2-4-9(10)19-12(13)14)8-3-5-11(17)16-15-8/h2-6,12H,1H3,(H,16,17)
InChIKey: HJMQDJPMQIHLPB-UHFFFAOYSA-N
DeepSMILES: COcccccc6OCF)F))))))cccc=O)[nH]n6
Scaffold Graph/Node/Bond level: O=c1ccc(-c2ccccc2)n[nH]1
Scaffold Graph/Node level: OC1CCC(C2CCCCC2)NN1
Scaffold Graph level: CC1CCC(C2CCCCC2)CC1
Functional groups: cOC; CF; c=O; cn[nH]c
Chemical classification
ClassyFire Kingdom: Organic compounds
ClassyFire Superclass: Organoheterocyclic compounds
ClassyFire Class: Diazines
ClassyFire Subclass: Pyridazines and derivatives
NP Classifier Biosynthetic pathway: Alkaloids
NP Classifier Superclass: Anthranilic acid alkaloids
Synonymous chemical names:
saradaferin
External chemical identifiers:
CID:CID_5723; ChEMBL:CHEMBL313842; ChEBI:CHEBI:46548; ZINC:ZINC000009230249; FDASRS:TQ358GWH6Y; SureChEMBL:SCHEMBL13334; MolPort-003-960-230
Chemical structure download


Zardaverine
Physicochemical properties
Property name Tool Property value
Molecular weight (g/mol) RDKit 268.22
Log P RDKit 2.05
Topological polar surface area (Å2) RDKit 64.21
Number of hydrogen bond acceptors RDKit 4
Number of hydrogen bond donors RDKit 1
Number of carbon atoms RDKit 12
Number of heavy atoms RDKit 19
Number of heteroatoms RDKit 7
Number of nitrogen atoms RDKit 2
Number of sulfur atoms RDKit 0
Number of chiral carbon atoms RDKit 0
Stereochemical complexity RDKit 0
Number of sp hybridized carbon atoms RDKit 0
Number of sp2 hybridized carbon atoms RDKit 10
Number of sp3 hybridized carbon atoms RDKit 2
Shape complexity RDKit 0.17
Number of rotatable bonds RDKit 4
Number of aliphatic carbocycles RDKit 0
Number of aliphatic heterocycles RDKit 0
Number of aliphatic rings RDKit 0
Number of aromatic carbocycles RDKit 1
Number of aromatic heterocycles RDKit 1
Number of aromatic rings RDKit 2
Total number of rings RDKit 2
Number of saturated carbocycles RDKit 0
Number of saturated heterocycles RDKit 0
Number of saturated rings RDKit 0
Number of Smallest Set of Smallest Rings (SSSR) RDKit 2


Zardaverine
Drug-likeness
Property nameToolProperty value
Number of Lipinski’s rule of 5 violations RDKit 0
Lipinski’s rule of 5 filter RDKit Passed
Number of Ghose filter violations RDKit 0
Ghose filter RDKit Passed
Veber filter RDKit Good
Pfizer 3/75 filter RDKit Bad
GSK 4/400 filter RDKit Good
Weighted quantitative estimate of drug-likeness (QEDw) score RDKit 0.921253


Zardaverine
ADME properties
Property nameToolProperty value
Bioavailability score SwissADME 0.55
Solubility class [ESOL] SwissADME Soluble
Solubility class [Silicos-IT] SwissADME Moderately soluble
Blood Brain Barrier permeation SwissADME Yes
Gastrointestinal absorption SwissADME High
Log Kp (Skin permeation, cm/s) SwissADME -6.41
Number of PAINS structural alerts SwissADME 0.0
Number of Brenk structural alerts SwissADME 0.0
CYP1A2 inhibitor SwissADME Yes
CYP2C19 inhibitor SwissADME No
CYP2C9 inhibitor SwissADME No
CYP2D6 inhibitor SwissADME No
CYP3A4 inhibitor SwissADME No
P-glycoprotein substrate SwissADME No


Zardaverine
Phytochemical - Human target proteins supported by experimental evidence associations
Human target proteins supported by experimental evidence
IMPPAT target identifierGene identifierHGNC symbolEntrez Gene identifierSource
TAR_EXP_001052ENSG00000186642PDE2A5138BindingDB
TAR_EXP_001053ENSG00000172572PDE3A5139BindingDB, ChEMBL
TAR_EXP_001055ENSG00000152270PDE3B5140BindingDB, ChEMBL
TAR_EXP_001057ENSG00000184588PDE4B5142BindingDB, ChEMBL
TAR_EXP_001060ENSG00000105650PDE4C5143ChEMBL
TAR_EXP_001072ENSG00000123360PDE1B5153BindingDB
TAR_EXP_001070ENSG00000073417PDE8A5151BindingDB
TAR_EXP_001071ENSG00000160191PDE9A5152BindingDB
TAR_EXP_001631ENSG00000165409TSHR7253ChEMBL
TAR_EXP_001811ENSG00000138735PDE5A8654BindingDB, ChEMBL
TAR_EXP_001061ENSG00000113448PDE4D5144BindingDB, ChEMBL
TAR_EXP_001028ENSG00000128655PDE11A50940BindingDB
TAR_EXP_001056ENSG00000065989PDE4A5141ChEMBL
TAR_EXP_000588ENSG00000171408PDE7B27115BindingDB
TAR_EXP_000701ENSG00000164120HPGD3248ChEMBL
TAR_EXP_000554ENSG00000101347SAMHD125939ChEMBL
TAR_EXP_000271ENSG00000165841CYP2C191557ChEMBL
TAR_EXP_000085ENSG00000112541PDE10A10846BindingDB
TAR_EXP_000004ENSG00000094631HDAC610013ChEMBL
TAR_EXP_000263ENSG00000140505CYP1A21544ChEMBL